P1436r1: Executor properties for affinity-based execution

Date: 2019-03-31

Audience: SG1, SG14, LEWG

Authors: Gordon Brown, Ruyman Reyes, Michael Wong, H. Carter Edwards, Thomas Rodgers, Mark Hoemmen

Contributors: Patrice Roy, Carl Cook, Jeff Hammond, Hartmut Kaiser, Christian Trott, Paul Blinzer, Alex Voicu, Nat Goodspeed, Tony Tye, Paul Blinzer, Chris Kohlhoff

Emails: gordon@codeplay.com, ruyman@codeplay.com, michael@codeplay.com, hedwards@nvidia.com, rodgert@twrodgers.com, mhoemme@sandia.gov

Reply to: gordon@codeplay.com

Changelog

P1436r1 (COL 2019)

P1436r0 (KON 2019)

P0796r3 (SAN 2018)

P0796r2 (RAP 2018)

P0796r1 (JAX 2018)

P0796r0 (ABQ 2017)

Abstract

This paper is the result of a request from SG1 at the 2018 San Diego meeting to split P0796: Supporting Heterogeneous & Distributed Computing Through Affinity [35] into two separate papers, one for the high-level interface and one for the low-level interface. This paper focusses on the high-level interface: a series of properties for querying affinity relationships and requesting affinity on work being executed. P0437 will focus on the low-level interface: a mechanism for discovering the topology and affinity properties of a given system, however this paper was not submitted in this mailing.

The aim of this paper is to provide a number of executor properties that if supported allow the user of an executor to query and manipulate the binding of execution agents and the underlying execution resources of the threads of execution they are run on.

Motivation

Affinity refers to the “closeness” in terms of memory access performance, between running code, the hardware execution resource on which the code runs, and the data that the code accesses. A hardware execution resource has “more affinity” to a part of memory or to some data, if it has lower latency and/or higher bandwidth when accessing that memory / those data.

On almost all computer architectures, the cost of accessing different data may differ. Most computers have caches that are associated with specific processing units. If the operating system moves a thread or process from one processing unit to another, the thread or process will no longer have data in its new cache that it had in its old cache. This may make the next access to those data slower. Many computers also have a Non-Uniform Memory Architecture (NUMA), which means that even though all processing units see a single memory in terms of programming model, different processing units may still have more affinity to some parts of memory than others. NUMA exists because it is difficult to scale non-NUMA memory systems to the performance needed by today’s highly parallel computers and applications.

One strategy to improve applications’ performance, given the importance of affinity, is processor and memory binding. Keeping a process bound to a specific thread and local memory region optimizes cache affinity. It also reduces context switching and unnecessary scheduler activity. Since memory accesses to remote locations incur higher latency and/or lower bandwidth, control of thread placement to enforce affinity within parallel applications is crucial to fuel all the cores and to exploit the full performance of the memory subsystem on NUMA computers.

Operating systems (OSes) traditionally take responsibility for assigning threads or processes to run on processing units. However, OSes may use high-level policies for this assignment that do not necessarily match the optimal usage pattern for a given application. Application developers must leverage the placement of memory and placement of threads for best performance on current and future architectures. For C++ developers to achieve this, native support for placement of threads and memory is critical for application portability. We will refer to this as the affinity problem.

The affinity problem is especially challenging for applications whose behavior changes over time or is hard to predict, or when different applications interfere with each other’s performance. Today, most OSes already can group processing units according to their locality and distribute processes, while keeping threads close to the initial thread, or even avoid migrating threads and maintain first touch policy. Nevertheless, most programs can change their work distribution, especially in the presence of nested parallelism.

Frequently, data are initialized at the beginning of the program by the initial thread and are used by multiple threads. While some OSes automatically migrate threads or data for better affinity, migration may have high overhead. In an optimal case, the OS may automatically detect which thread access which data most frequently, or it may replicate data which are read by multiple threads, or migrate data which are modified and used by threads residing on remote locality groups. However, the OS often does a reasonable job, if the machine is not overloaded, if the application carefully uses first-touch allocation, and if the program does not change its behavior with respect to locality.

The affinity interface we propose should help computers achieve a much higher fraction of peak memory bandwidth when using parallel algorithms. In the future, we plan to extend this to heterogeneous and distributed computing. This follows the lead of OpenMP [2], which has plans to integrate its affinity model with its heterogeneity model [3]. (One of the authors of this document participated in the design of OpenMP’s affinity model.)

Motivational examples

To identify the requirements for supporting affinity we have looked at a number of use cases where affinity between memory locality and execution can provide better performance.

Consider the following code example (Listing 1) where the C++17 parallel STL algorithm for_each is used to modify the elements of a std::vector data on an executor that will execute on a NUMA system with a number of CPU cores. However the memory is allocated by the std::vector default allocator immediately during the construction of data on memory local to the calling thread of execution. This means that the memory allocated for data may have poor locality to all of the NUMA regions on the system, other than the one in which the constructor executed. Therefore, accesses in the parallel for_each made by threads in other NUMA regions will incur high latency. In this example, this is avoided by migrating data to have better affinity with the NUMA regions on the system using an executor with the bulk_execution_affinity.scatter property applied, before it is accessed by the for_each. Note that a mechanism for migration is not yet specified in this paper, so this example currently uses an arbitrary vendor API, vendor_api::migrate. Our intention is that a future revision of this paper will specify a standard mechanism for migration

// NUMA executor representing N NUMA regions.
numa_executor exec;

// Storage required for vector allocated on construction local to current thread
// of execution, (N == 0).
std::vector<float> data(N * SIZE);

// Require the NUMA executor to bind its migration of memory to the underlying
// memory resources in a scatter pattern.
auto affinityExec = std::execution::require(exec,
  bulk_execution_affinity.scatter);

// Migrate the memory allocated for the vector across the NUMA regions in a
// scatter pattern.
vendor_api::migrate(data, affinityExec);

// Placement of data is local to NUMA region 0, so data for execution on other
// NUMA nodes must is migrated when accessed.
std::for_each(std::execution::par.on(affinityExec), std::begin(data),
  std::end(data), [=](float &value) { do_something(value): });

Listing 1: Migrating previously allocated memory.

Now consider a similar code example (Listing 2) where again the C++17 parallel STL algorithm for_each is used to modify the elements of a std::vector data on an executor that will execute on a NUMA system with a number of CPU cores. However, instead of migrating data to have affinity with the NUMA regions, data is allocated within a bulk execution by an executor with the bulk_execution_affinity.scatter property applied so that data is allocated with affinity. Then when the for_each is called with the same executor, data maintains its affinity with the NUMA regions.

// NUMA executor representing N NUMA regions.
numa_executor exec;

// Reserve space in a vector for a unique_ptr for each index in the bulk
// execution.
std::vector<std::unique_ptr<float[SIZE]>> data{};
data.reserve(N);

// Require the NUMA executor to bind its allocation of memory to the underlying
// memory resources in a scatter patter.
auto affinityExec = std::execution::require(exec,
  bulk_execution_affinity.scatter);

// Launch a bulk execution that will allocate each unique_ptr in the vector with
// locality to the nearest NUMA region.
affinityExec.bulk_execute([&](size_t id) {
  data[id] = std::make_unique<float>(); }, N, sharedFactory);

// Execute a for_each using the same executor so that each unique_ptr in the
// vector maintains its locality.
std::for_each(std::execution::par.on(affinityExec), std::begin(data),
  std::end(data), [=](float &value) { do_something(value): });

Listing 2: Aligning memory and process affinity.

Background Research

In this paper we describe the problem space of affinity for C++, the various challenges which need to be addressed in defining a partitioning and affinity interface for C++, and some suggested solutions. These include:

Wherever possible, we also evaluate how an affinity-based solution could be scaled to support both distributed and heterogeneous systems.

State of the art

The affinity problem existed for some time, and there are a number of third-party libraries and standards which provide APIs to solve the problem. In order to standardize this process for C++, we must carefully look at all of these approaches and identify which ideas are suitable for adoption into C++. Below is a list of the libraries and standards from which this proposal will draw:

Libraries such as the Portable Hardware Locality (hwloc) library provide a low-level of hardware abstraction, and offer a solution for the portability problem by supporting many platforms and operating systems. This and similar approaches use a tree structure to represent details of CPUs and the memory system. However, even some current systems cannot be represented correctly by a tree, if the number of hops between two sockets varies between socket pairs [2].

Some systems give additional user control through explicit binding of threads to processors through environment variables consumed by various compilers, system commands, or system calls. Examples of system commands include Linux’s taskset and numactl, and Windows’ start /affinity. System call examples include Solaris’ pbind(), Linux’s sched_setaffinity(), and Windows’ SetThreadAffinityMask().

Relative affinity of execution resources

In order to make decisions about where to place execution or allocate memory in a given system’s resource topology, it is important to understand the concept of affinity between different hardware and software resources. This is usually expressed in terms of latency between two resources. Distance does not need to be symmetric in all architectures. The relative position of two components in a system’s topology does not necessarily indicate their affinity. For example, two cores from two different CPU sockets may have the same latency to access the same NUMA memory node.

This can be scaled to heterogeneous and distributed systems, as the relative affinity between components can apply to discrete heterogeneous and distributed systems as well.

Inaccessible memory

The initial solution proposed by this paper may only target systems with a single addressable memory region. It may therefore exclude certain heterogeneous devices such as some discrete GPUs. However, in order to maintain a unified interface going forward, the initial solution should consider these devices and be able to scale to support them in the future.

Proposal

Overview

In this paper we propose executor properties that can be used for querying the affinity between different hardware and software resources within a system available that are available to executors and to require binding of execution agents to the underlying hardware or software resources in order to achieve performance through data locality. These properties provide a low granularity and is aimed at users who may have little or no knowledge of the system architecture.

The interface described in this paper builds on the existing interface for executors and execution contexts defined in the executors proposal [22].

Execution resources

An execution resource represents an abstraction of a hardware or software layer that guarantees a particular set of affinity properties, where the level of abstraction is implementation-defined. An implementation is permitted to migrate any underlying resources providing it guarantees the affinity properties remain consistent. This allows freedom for the implementor but also consistency for users.

If an execution resource is valid, then it must always point to the same underlying thing. For example, a resource cannot first point to one CPU core, and then suddenly point to a different CPU core. An execution context can thus rely on properties like binding of operating system threads to CPU cores. However, the “thing” to which an execution resource points may be a dynamic, possibly a software-managed pool of hardware. Here are three examples of this phenomenon:

  1. The “hardware” may actually be a virtual machine (VM). At any point, the VM may pause, migrate to different physical hardware, and resume. If the VM presents the same virtual hardware before and after the migration, then the resources that an application running on the VM sees should not change.
  2. The OS may maintain a pool of a varying number of CPU cores as a shared resource among different user-level processes. When a process stops using the resource, the OS may reclaim cores. It may make sense to present this pool as an execution resource.
  3. A low-level device driver on a laptop may switch between a “discrete” GPU and an “integrated” GPU, depending on utilization and power constraints. If the two GPUs have the same instruction set and can access the same memory, it may make sense to present them as a “virtualized” single execution resource.

In summary, an execution resource either identifies a thing uniquely, or harmlessly points to nothing.

Header <execution> synopsis

Below (Listing 3) is a proposed extension to the <execution> header.

namespace std {
namespace experimental {
namespace execution {

// Bulk execution affinity properties

struct bulk_execution_affinity_t;

constexpr bulk_execution_affinity_t bulk_execution_affinity;

// Concurrency property

struct concurrency_t;

constexpr concurrency_t concurrency;

// Execution locality intersection property

struct execution_locality_intersection_t;

constexpr execution_locality_intersection_t<DestExecutor>;

// Memory locality intersection property

struct memory_locality_intersection_t;

constexpr memory_locality_intersection_t memory_locality_intersection;

}  // execution
}  // experimental
}  // std

Listing 3: Header synopsis

Bulk execution affinity properties

We propose an executor property group called bulk_execution_affinity which contains the nested properties none, balanced, scatter or compact. Each of these properties, if applied to an executor enforces a particular guarantee of binding execution agents to the execution resources associated with the executor in a particular pattern.

Example

Below is an example (Listing 4) of executing a parallel task over 8 threads using bulk_execute, with the affinity binding bulk_execution_affinity.scatter. We request affinity binding using prefer and then check to see if the executor is able to support it using query.

{
  bulk_executor exec;

  auto affExec = execution::prefer(exec,
    execution::bulk_execution_affinity.scatter);

  if (execution::query(affExec, execution::bulk_execution_affinity.scatter)) {
    std::cout << "bulk_execute using bulk_execution_affinity.scatter"
      << std::endl;
  }

  affExec.bulk_execute([](std::size_t i, shared s) {
    func(i);
  }, 8, sharedFactory);
}

Listing 4: Example of using the bulk_execution_affinity property

Proposed Wording

The bulk_execution_affinity_t property is a behavioral property as defined in P0443 [22] which describes the guarantees an executor provides to the binding of execution agents created by a call to bulk_execute to the underlying threads of execution and to the locality of those threads of execution.

The bulk_execution_affinity_t property provides nested property types and objects as described below, where:

Nested Property Type Nested Property Name Requirements
bulk_execution_affinity_t::none_t bulk_execution_affinity_t::none A call to e.bulk_execute(f, s, sf) has no requirements on the binding of execution agents to the underlying execution resources.
bulk_execution_affinity_t::scatter_t bulk_execution_scatter_t::scatter A call to e.bulk_execute(f, s, sf) must bind the created execution agents to the underlying execution resources (ordered by physical closeness) such that they are distributed equally across the execution resources in a round-robin fashion.

If the execution context associated with e fails to bind the created execution agents to the underlying execution resources then bulk_execute must throw an exception.
bulk_execution_affinity_t::compact_t bulk_execution_compact_t::compact A call to e.bulk_execute(f, s, sf) must bind the created execution agents to the underlying execution resources such that they are distributed as close as possible to the execution resource of the thread of execution which created them.

If the execution context associated with e fails to bind the created execution agents to the underlying execution resources then bulk_execute must throw an exception.
bulk_execution_affinity_t::balanced_t bulk_execution_balanced_t::balanced A call to e.bulk_execute(f, s, sf) must bind the created execution agents to the underlying execution resources (ordered by physical closeness) such that they are distributed equally across the execution resources in a bin packing fashion.

If the execution context associated with e fails to bind the created execution agents to the underlying execution resources then bulk_execute must throw an exception.

[Note: The requirements of the bulk_execution_affinity_t nested properties do not enforce a specific binding, simply that the binding follows the requirements set out above and that the pattern is consistent across invocations of the bulk execution functions. —end note]

[Note: It’s expected that the default value of bulk_execution_affinity_t for most executors be bulk_execution_affinity_t::none_t. —end note]

Note: The terms used for the bulk_execution_affinity_t nested properties are derived from the OpenMP properties [[33] including the Intel specific balanced affinity binding [[34] —end note]

For any two invocations; e1.bulk_execute(f1, s1, sf1) and e2.bulk_execute(f2, s2, sf2), the binding of execution agents to the underlying execution resources must be consistent, if:

[Note: If you have two invocation of bulk_execute where the binding of execution agents to the underlying execution resources is guaranteed to be consistent, this can lead to limitations of resource utilization. —end note]

[Note: If two executors e1 and e2 invoke a bulk execution function in order, where execution::query(e1, execution::context) == query(e2, execution::context) is true and execution::query(e1, execution::bulk_execution_affinity) == query(e2, execution::bulk_execution_affinity) is false, this will likely result in e1 binding execution agents if necessary to achieve the requested affinity pattern and then e2 rebinding to achieve the new affinity pattern. Rebinding execution agents to execution resources may take substantial time and may affect performance of subsequent code. —end note]

Concurrency property

We propose a query-only executor property called concurrency_t which returns the maximum potential concurrency available to executor.

Example

Below is an example (Listing 5) of querying an executor for the maximum concurrency it can provide via concurrency.

{
  executor exec;

  auto maxConcurrency = execution::query(exec, execution::concurrency);
}

Listing 5: Example of using the concurrency property

Proposed Wording

The concurrency_t property (Listing 6) is a query-only property as defined in P0443 [22].

struct concurrency_t
{
  static constexpr bool is_requirable = false;
  static constexpr bool is_preferable = false;

  using polymorphic_query_result_type = size_t;

  template<class Executor>
    static constexpr decltype(auto) static_query_v
      = Executor::query(concurrency_t());
};

Listing 6: Proposed specification for concurrency_t

The concurrency_t property can be used only with query, which returns the maximum potential concurrency available to the executor. If the value is not well defined or not computable, 0 is returned.

The value returned from execution::query(e, concurrency_t), where e is an executor, shall not change between invocations.

[Note: The expectation here is that the maximum available concurrency for an executor as described here is equivalent to calling this_thread::hardware_concurrency() —end note]

Execution locality intersection property

We propose a query-only executor property called execution_locality_intersection_t which returns the maximum potential concurrency that ia available to both of two executors.

Example

Below is an example (Listing 7) of querying whether two executors have overlapping maximum concurrency using execution_locality_intersection.

{
  executor_a execA;
  executor_b execB;

  auto concurrencyOverlap = execution::query(execA,
    execution::execution_locality_intersection(execB));
}

Listing 7: Example of using the concurrency property

Proposed Wording

The execution_locality_intersection_t property (Listing 8) is a query-only property as defined in P0443 [22].

struct execution_locality_intersection_t
{
  static constexpr bool is_requirable = false;
  static constexpr bool is_preferable = false;

  using polymorphic_query_result_type = size_t;

  template<class Executor, class DestExecutor>
    static constexpr decltype(auto) static_query_v
      = Executor::query(execution_locality_intersection_t{}(DestExecutor{})));

  template <class DestExecutor>
  size_t operator()(DestExecutor &&d);
};

Listing 8: Proposed specification for execution_locality_intersection_t

The execution_locality_intersection_t property can be used only with query, which returns the maximum potential concurrency available to both executors. If the value is not well defined or not computable, 0 is returned.

The value returned from execution::query(e1, execution_locality_intersection_t(e2)), where e1 and e2 are executors, shall not change between invocations.

[Note: The expectation here is that the maximum available concurrency for an executor as described here is equivalent to calling this_thread::hardware_concurrency() —end note]

Memory locality intersection property

We propose a query-only executor property called execution_locality_intersection_t which specifies whether two executors share a common memory locality, such that memory allocated by those executors both have similar affinity.

This is useful for determining whether memory local to one executor would require migration in order to be local to another executor.

Example

Below is an example (Listing 9) of querying whether two executors have common memory locality execution_locality_intersection.

{
  executor_a execA;
  executor_b execB;

  auto concurrencyOverlap = execution::query(execA,
    execution::execution_locality_intersection(execB));
}

Listing 9: Example of using the concurrency property

Proposed Wording

The memory_locality_intersection_t property (Listing 10) is a query-only property as defined in P0443 [22].

struct memory_locality_intersection_t
{
  static constexpr bool is_requirable = false;
  static constexpr bool is_preferable = false;

  using polymorphic_query_result_type = bool;

  template<class Executor, class DestExecutor>
    static constexpr decltype(auto) static_query_v
      = Executor::query(memory_locality_intersection_t{}(DestExecutor{})));

  template <class DestExecutor>
  bool operator()(DestExecutor &&d);
};

Listing 10: Proposed specification for memory_locality_intersection_t

The memory_locality_intersection_t property can be used only with query, which returns true if both executors share a common address space, and false otherwise. If the value is not well defined or not computable, false is returned.

The value returned from execution::query(e1, memory_locality_intersection_t(e2)), where e1 and e2 are executors, shall not change between invocations.

Future Work

There are a number of additional features which we are considering for inclusion in this paper but are not ready yet.

Migrating data

This paper currently provides a mechanism for detecting whether two executors share a common memory locality. However, it does not provide a way to invoke migration of data allocated local to one executor into the locality of another executor.

We envision that this mechanic could be facilitated by a customization point on two executors and perhaps a span or mdspan accessor.

Supporting different affinity domains

This paper currently assumes a NUMA-like system, however there are many other kinds of systems with many different architectures with different kinds of processors, memory and connections between them.

In order to accurately take advantage of the range of systems available now and in the future we will need some way to parameterize or enumerate the different affinity domains which an executor can structure around.

Furthermore, in order to have control over those affinity domains we need a way in which to mask out the components of that domain that we wish to work with.

However, whichever option we opt for, it must be in such a way as to allow further additions as new system architectures become available.

Acknowledgments

Thanks to Christopher Di Bella, Toomas Remmelg, and Morris Hafner for their reviews and suggestions.

References

[1] P0687: Data Movement in C++

[2] The Design of OpenMP Thread Affinity

[3] Euro-Par 2011 Parallel Processing: 17th International, Affinity Matters

[4] Portable Hardware Locality

[5] SYCL 1.2.1

[6] OpenCL 2.2

[7] HSA

[8] OpenMP 5.0

[9] cpuaff

[10] Persistent Memory Programming

[11] MEMKIND

[12] Solaris pbind()

[13] Linux sched_setaffinity()

[14] Windows SetThreadAffinityMask()

[15] Chapel

[16] X10

[17] UPC++

[18] TBB

[19] HPX

[20] MADNESS

[21] Portable Hardware Locality Istopo

[22] A Unified Executors Proposal for C++

[23] P0737 : Execution Context of Execution Agents

[24] Exposing the Locality of new Memory Hierarchies to HPC Applications

[25] MPI

[26] Parallel Virtual Machine

[27] Building Fault-Tolerant Parallel Applications

[28] Post-failure recovery of MPI communication capability

[29] Fault Tolerance in MPI Programs

[30] p0323r4 std::expected

[31]: Intel® Movidius™ Neural Compute Stick

[32] MADNESS: A Multiresolution, Adaptive Numerical Environment for Scientific Simulation

[33] OpenMP topic: Affinity

[34] Balanced Affinity Type

[35] Supporting Heterogeneous & Distributed Computing Through Affinity

[36] System topology discovery for heterogeneous & distributed computing